Package: KOGMWU
Type: Package
Title: Functional Summary and Meta-Analysis of Gene Expression Data
Version: 1.2
Date: 2019-02-19
Author: Mikhail V. Matz
Maintainer: Mikhail V. Matz <matz@utexas.edu>
Description: Rank-based tests for enrichment of KOG (euKaryotic
        Orthologous Groups) classes with up- or down-regulated genes
        based on a continuous measure. The meta-analysis is based on
        correlation of KOG delta-ranks across datasets (delta-rank is
        the difference between mean rank of genes belonging to a KOG
        class and mean rank of all other genes). With binary measure (1
        or 0 to indicate significant and non-significant genes),
        one-tailed Fisher's exact test for over-representation of each
        KOG class among significant genes will be performed.
License: GPL-3
Depends: R (>= 2.10), pheatmap
NeedsCompilation: no
Packaged: 2026-07-03 08:32:35 UTC; root
Repository: https://z0on.r-universe.dev
Date/Publication: 2019-02-19 18:00:03 UTC
RemoteUrl: https://github.com/cran/KOGMWU
RemoteRef: HEAD
RemoteSha: 6ac264c08e17ac8736f70e58da62f9fa91af032c